diff --git a/src/amd/vulkan/bvh/update_gfx12.comp b/src/amd/vulkan/bvh/update_gfx12.comp
index 32da58fca68..e4599cd7126 100644
--- a/src/amd/vulkan/bvh/update_gfx12.comp
+++ b/src/amd/vulkan/bvh/update_gfx12.comp
@@ -139,6 +139,10 @@ main()
       uvec3 extent_exponents = floatBitsToUint(extent) >> 23;
 
       if (cluster.invocation_index == 0) {
+         if (!VK_BUILD_FLAG(RADV_BUILD_FLAG_UPDATE_IN_PLACE)) {
+            DEREF(dst_node).primitive_base_id = src_node.primitive_base_id;
+            DEREF(dst_node).internal_base_id = src_node.internal_base_id;
+         }
          DEREF(dst_node).origin = origin;
          DEREF(dst_node).child_count_exponents = extent_exponents.x | (extent_exponents.y << 8) |
                                                  (extent_exponents.z << 16) | (valid_child_count_minus_one << 28);